Frontiers | GET_PHYLOMARKERS, a Software Package to Select Optimal Orthologous Clusters for Phylogenomics and Inferring Pan-Genome Phylogenies, Used for a Critical Geno-Taxonomic Revision of the Genus Stenotrophomonas
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea | Nature Communications
Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups | PLOS ONE
Whole genome phylogeny of Cyanobacteria documents a distinct evolutionary trajectory of marine picocyanobacteria | bioRxiv
An estimate of the deepest branches of the tree of life from ancient vertically evolving genes | eLife
Phylogenetic bacterial genome tree showing the diversity, maximum... | Download Scientific Diagram
Phylogenetic trees: Whither microbiology? - ScienceDirect
A rooted phylogenetic tree of Bacteria computed from representative... | Download Scientific Diagram
Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups | PLOS ONE
New tool helps find gene markers in microorganisms - DOE Joint Genome Institute
Genes | Free Full-Text | Genomics in Bacterial Taxonomy: Impact on the Genus Pseudomonas
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0 | Nature Communications
Antioxidants | Free Full-Text | A Large-Scale Multiple Genome Comparison of Acidophilic Archaea (pH ≤ 5.0) Extends Our Understanding of Oxidative Stress Responses in Polyextreme Environments
A rooted phylogeny resolves early bacterial evolution | Science
Assessment of Molecular Markers for Classification of Bacterial Phyla using Topological Dissimilarity of Phylogenetic Trees | Semantic Scholar
Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices | PLOS ONE
Phylogenetic trees: Whither microbiology? - ScienceDirect
Molecular Markers in Phylogenetic Studies-A Review | Semantic Scholar
rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing | BMC Microbiology | Full Text
Maximum likelihood tree of all bacterial species-level MAGs.... | Download Scientific Diagram
Phylogenetic tree of bacteria cultured from the three marine sediment... | Download Scientific Diagram
Insights into the phylogeny and coding potential of microbial dark matter | Nature
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea | Nature
